get_network() extracts the reconstructed (and selected) network from a
carmon object.
Usage
get_network(carmon_obj, labels = NULL)
Arguments
- carmon_obj
The object of S3 class carmon or of S3
class carmon_rec.
- labels
Optional. Used only when carmon_obj is of the S3 class
carmon_rec, a vector of strings containing all the variable names.
Value
get_network() returns the selected network, in the form of an
object of class igraph. If using an object of class carmon_rec, nodes
will have no labels, unless provided through labels.
Examples
data(multi_omics_small)
c_obj <- carmon(multi_omics_small,
net_method = "correlation",
cor_quant = 0.25, analysis = FALSE, plot = FALSE,
verbose = FALSE
)
network <- get_network(c_obj)
